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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs12114405 chr8:258690 C/T MCPH1 chr8:6264113-6506025:+ -0.71 -6.63 1.12E-10 Box Plot
BLCA rs12114405 chr8:258690 C/T TNKS chr8:9413424-9639856:+ -0.58 -6.75 5.41E-11 Box Plot
BLCA rs12115219 chr9:108168568 A/G KRTAP13-1 chr21:31768392-31769140:+ -0.18 -6.05 3.52E-9 Box Plot
BLCA rs12136473 chr1:4798298 C/T KRTAP13-1 chr21:31768392-31769140:+ 0.13 5.96 5.7E-9 Box Plot
BLCA rs12145080 chr1:121185531 C/T NBPF14 chr1:148003642-148025863:- -0.28 -6.21 1.36E-9 Box Plot
BLCA rs12145431 chr1:47947483 A/C ENTPD2 chr9:139942550-139948497:- -0.59 -6.07 3.12E-9 Box Plot
BLCA rs12154199 chr6:11347859 G/T ATP5EP2 chr13:28519343-28519727:+ 0.35 6.11 2.5E-9 Box Plot
BLCA rs12154199 chr6:11347859 G/T FLJ44635 chrX:71364034-71381599:+ 0.35 6.02 4.13E-9 Box Plot
BLCA rs12154199 chr6:11347859 G/T RPL19P12 chr7:102781796-102782386:- 0.39 6.62 1.24E-10 Box Plot
BLCA rs12158480 chr22:23986055 T/C IGLL3 chr22:25713888-25716191:+ 0.42 6.08 2.96E-9 Box Plot
BLCA rs12167140 chr22:23971028 C/T IGLL3 chr22:25713888-25716191:+ 0.39 7.03 9.51E-12 Box Plot
BLCA rs12169123 chr22:18936620 A/G NUP98 chr11:3692313-3819022:- 0.34 5.96 5.79E-9 Box Plot
BLCA rs12170399 chr22:23972141 A/G IGLL3 chr22:25713888-25716191:+ 0.38 6.87 2.58E-11 Box Plot
BLCA rs12170958 chr22:43374191 A/G L3MBTL2 chr22:41601209-41627275:+ -1.03 -7.19 3.44E-12 Box Plot
BLCA rs12170958 chr22:43374191 A/G PHF5A chr22:41855721-41864729:- -0.8 -6.46 3.11E-10 Box Plot